Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Gm21362-201ENSMUST00000194272 928 ntBASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shisa3Q3UPR0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Gm7284-201ENSMUST00000131667 944 ntBASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shisa3Q3UPR0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shisa3Q3UPR0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms