Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Gm11950-201ENSMUST00000121615 838 ntBASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Gm45328-201ENSMUST00000210942 917 ntBASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43aQ3TL54 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Gm17808-201ENSMUST00000200859 894 ntBASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim43aQ3TL54 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Gm14722-201ENSMUST00000118943 689 ntBASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Gm7284-201ENSMUST00000131667 944 ntBASIC16.24■□□□□ 0.19
Trim43aQ3TL54 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim43aQ3TL54 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Gm6623-201ENSMUST00000173570 544 ntBASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms