Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.56■□□□□ 0.24
CiitaP79621 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.56■□□□□ 0.24
CiitaP79621 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Gm20553-201ENSMUST00000204205 844 ntBASIC16.56■□□□□ 0.24
CiitaP79621 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CiitaP79621 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.56■□□□□ 0.24
CiitaP79621 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CiitaP79621 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.55■□□□□ 0.24
CiitaP79621 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.55■□□□□ 0.24
CiitaP79621 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.55■□□□□ 0.24
CiitaP79621 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.55■□□□□ 0.24
CiitaP79621 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.55■□□□□ 0.24
CiitaP79621 Chchd1-203ENSMUST00000224633 557 ntBASIC16.55■□□□□ 0.24
CiitaP79621 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CiitaP79621 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.55■□□□□ 0.24
CiitaP79621 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CiitaP79621 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CiitaP79621 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CiitaP79621 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CiitaP79621 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CiitaP79621 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.54■□□□□ 0.24
CiitaP79621 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CiitaP79621 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CiitaP79621 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CiitaP79621 Gm9385-201ENSMUST00000117563 472 ntBASIC16.53■□□□□ 0.24
CiitaP79621 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.53■□□□□ 0.24
CiitaP79621 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.53■□□□□ 0.24
CiitaP79621 Rpph1-201ENSMUST00000175096 319 ntBASIC16.53■□□□□ 0.24
CiitaP79621 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.53■□□□□ 0.24
CiitaP79621 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CiitaP79621 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CiitaP79621 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CiitaP79621 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.52■□□□□ 0.24
CiitaP79621 Prob1-201ENSMUST00000097619 3021 ntBASIC16.52■□□□□ 0.24
CiitaP79621 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CiitaP79621 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms