Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rpl39P62892 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rpl39P62892 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.94□□□□□ -0.66
Rpl39P62892 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm44430-201ENSMUST00000203376 995 ntBASIC10.94□□□□□ -0.66
Rpl39P62892 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm7367-201ENSMUST00000057611 492 ntBASIC10.94□□□□□ -0.66
Rpl39P62892 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Rpl39P62892 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.94□□□□□ -0.66
Rpl39P62892 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Rpl39P62892 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rpl39P62892 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.93□□□□□ -0.66
Rpl39P62892 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Rpl39P62892 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.93□□□□□ -0.66
Rpl39P62892 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rpl39P62892 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.93□□□□□ -0.66
Rpl39P62892 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Gm5417-201ENSMUST00000079706 384 ntBASIC10.93□□□□□ -0.66
Rpl39P62892 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.93□□□□□ -0.66
Rpl39P62892 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.93□□□□□ -0.66
Rpl39P62892 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.93□□□□□ -0.66
Rpl39P62892 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rpl39P62892 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Rpl39P62892 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.92□□□□□ -0.66
Rpl39P62892 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rpl39P62892 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.92□□□□□ -0.66
Rpl39P62892 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms