Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Rab3c-203ENSMUST00000224180 967 ntBASIC12.12□□□□□ -0.47
Rab4aP56371 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rab4aP56371 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.12□□□□□ -0.47
Rab4aP56371 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.12□□□□□ -0.47
Rab4aP56371 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rab4aP56371 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Rab4aP56371 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.12□□□□□ -0.47
Rab4aP56371 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Rab4aP56371 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rab4aP56371 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rab4aP56371 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Rab4aP56371 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rab4aP56371 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rab4aP56371 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm26524-201ENSMUST00000192339 390 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.11□□□□□ -0.47
Rab4aP56371 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab4aP56371 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.11□□□□□ -0.47
Rab4aP56371 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.11□□□□□ -0.47
Rab4aP56371 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rab4aP56371 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.1□□□□□ -0.47
Rab4aP56371 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.1□□□□□ -0.47
Rab4aP56371 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.1□□□□□ -0.47
Rab4aP56371 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm4974-201ENSMUST00000209974 875 ntBASIC12.1□□□□□ -0.47
Rab4aP56371 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rab4aP56371 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.1□□□□□ -0.47
Rab4aP56371 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rab4aP56371 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.1□□□□□ -0.47
Rab4aP56371 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms