Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm10566-201ENSMUST00000086739 996 ntBASIC12.73□□□□□ -0.37
Nkx2-1P50220 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-1P50220 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Efs-202ENSMUST00000227037 2540 ntBASIC12.72□□□□□ -0.37
Nkx2-1P50220 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm6433-201ENSMUST00000118634 875 ntBASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.72□□□□□ -0.37
Nkx2-1P50220 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.72□□□□□ -0.37
Nkx2-1P50220 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-1P50220 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.71□□□□□ -0.37
Nkx2-1P50220 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Gm15565-201ENSMUST00000118890 427 ntBASIC12.71□□□□□ -0.37
Nkx2-1P50220 Gm12134-201ENSMUST00000122109 520 ntBASIC12.71□□□□□ -0.37
Nkx2-1P50220 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-1P50220 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-1P50220 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.7□□□□□ -0.38
Nkx2-1P50220 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms