Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox2P48432 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Sox2P48432 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox2P48432 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.37□□□□□ -0.11
Sox2P48432 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox2P48432 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.37□□□□□ -0.11
Sox2P48432 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.37□□□□□ -0.11
Sox2P48432 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sox2P48432 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Sox2P48432 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox2P48432 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.36□□□□□ -0.11
Sox2P48432 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox2P48432 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.36□□□□□ -0.11
Sox2P48432 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox2P48432 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.36□□□□□ -0.11
Sox2P48432 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Sox2P48432 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox2P48432 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox2P48432 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.35□□□□□ -0.11
Sox2P48432 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox2P48432 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox2P48432 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.35□□□□□ -0.11
Sox2P48432 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sox2P48432 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.35□□□□□ -0.11
Sox2P48432 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms