Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sox5P35710 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox5P35710 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox5P35710 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Sox5P35710 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.73■□□□□ 0.27
Sox5P35710 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Gm6659-201ENSMUST00000174752 547 ntBASIC16.73■□□□□ 0.27
Sox5P35710 Gm25745-201ENSMUST00000174945 133 ntBASIC16.73■□□□□ 0.27
Sox5P35710 Gm27742-201ENSMUST00000184667 60 ntBASIC16.73■□□□□ 0.27
Sox5P35710 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sox5P35710 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.73■□□□□ 0.27
Sox5P35710 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.73■□□□□ 0.27
Sox5P35710 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sox5P35710 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox5P35710 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sox5P35710 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 AA414768-201ENSMUST00000121924 1257 ntBASIC16.72■□□□□ 0.27
Sox5P35710 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox5P35710 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.72■□□□□ 0.27
Sox5P35710 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sox5P35710 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox5P35710 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sox5P35710 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sox5P35710 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Sox5P35710 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox5P35710 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.71■□□□□ 0.27
Sox5P35710 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.71■□□□□ 0.27
Sox5P35710 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.71■□□□□ 0.27
Sox5P35710 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sox5P35710 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sox5P35710 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sox5P35710 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sox5P35710 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.71■□□□□ 0.27
Sox5P35710 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.71■□□□□ 0.27
Sox5P35710 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox5P35710 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox5P35710 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.7■□□□□ 0.26
Sox5P35710 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox5P35710 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms