Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.68■□□□□ 0.1
Mmp13P33435 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.68■□□□□ 0.1
Mmp13P33435 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mmp13P33435 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Mmp13P33435 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Mmp13P33435 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Mmp13P33435 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.67■□□□□ 0.1
Mmp13P33435 Gm27459-201ENSMUST00000184860 107 ntBASIC15.67■□□□□ 0.1
Mmp13P33435 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.67■□□□□ 0.1
Mmp13P33435 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.67■□□□□ 0.1
Mmp13P33435 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mmp13P33435 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Mmp13P33435 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Mmp13P33435 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.66■□□□□ 0.1
Mmp13P33435 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.66■□□□□ 0.1
Mmp13P33435 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.66■□□□□ 0.1
Mmp13P33435 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.66■□□□□ 0.1
Mmp13P33435 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.66■□□□□ 0.1
Mmp13P33435 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.66■□□□□ 0.1
Mmp13P33435 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.66■□□□□ 0.1
Mmp13P33435 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Mmp13P33435 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mmp13P33435 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Mmp13P33435 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Mmp13P33435 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Mmp13P33435 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Mmp13P33435 Efs-202ENSMUST00000227037 2540 ntBASIC15.65■□□□□ 0.1
Mmp13P33435 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Mmp13P33435 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.65■□□□□ 0.1
Mmp13P33435 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Mmp13P33435 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Mmp13P33435 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms