Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mmp3P28862 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Mmp3P28862 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Mmp3P28862 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.34■□□□□ 0.21
Mmp3P28862 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.34■□□□□ 0.21
Mmp3P28862 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.34■□□□□ 0.21
Mmp3P28862 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.34■□□□□ 0.21
Mmp3P28862 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.34■□□□□ 0.21
Mmp3P28862 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Mmp3P28862 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mmp3P28862 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.34■□□□□ 0.21
Mmp3P28862 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.34■□□□□ 0.21
Mmp3P28862 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mmp3P28862 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp3P28862 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp3P28862 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Mmp3P28862 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.21
Mmp3P28862 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.33■□□□□ 0.2
Mmp3P28862 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.33■□□□□ 0.2
Mmp3P28862 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.33■□□□□ 0.2
Mmp3P28862 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.33■□□□□ 0.2
Mmp3P28862 Gm18057-201ENSMUST00000208220 503 ntBASIC16.33■□□□□ 0.2
Mmp3P28862 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Mmp3P28862 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.33■□□□□ 0.2
Mmp3P28862 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Mmp3P28862 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp3P28862 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp3P28862 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.32■□□□□ 0.2
Mmp3P28862 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Mmp3P28862 Mir6956-201ENSMUST00000183598 62 ntBASIC16.32■□□□□ 0.2
Mmp3P28862 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.32■□□□□ 0.2
Mmp3P28862 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp3P28862 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Mmp3P28862 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Mmp3P28862 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Mmp3P28862 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Dancr-204ENSMUST00000132389 2347 ntBASIC16.31■□□□□ 0.2
Mmp3P28862 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.31■□□□□ 0.2
Mmp3P28862 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Mmp3P28862 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.31■□□□□ 0.2
Mmp3P28862 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.31■□□□□ 0.2
Mmp3P28862 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.31■□□□□ 0.2
Mmp3P28862 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Mmp3P28862 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Mmp3P28862 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Mmp3P28862 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.3■□□□□ 0.2
Mmp3P28862 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.3■□□□□ 0.2
Mmp3P28862 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Mmp3P28862 Gm44872-201ENSMUST00000207864 420 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms