Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
P04224 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.48□□□□□ -0.25
P04224 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.48□□□□□ -0.25
P04224 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
P04224 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.47□□□□□ -0.25
P04224 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.47□□□□□ -0.25
P04224 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P04224 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.47□□□□□ -0.25
P04224 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P04224 Gm2274-201ENSMUST00000184539 609 ntBASIC13.47□□□□□ -0.25
P04224 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
P04224 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.47□□□□□ -0.25
P04224 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.47□□□□□ -0.25
P04224 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.47□□□□□ -0.25
P04224 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P04224 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.47□□□□□ -0.25
P04224 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
P04224 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P04224 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P04224 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.46□□□□□ -0.25
P04224 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P04224 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P04224 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P04224 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Gm11336-201ENSMUST00000118168 334 ntBASIC13.46□□□□□ -0.25
P04224 Gm16061-201ENSMUST00000122167 857 ntBASIC13.46□□□□□ -0.25
P04224 Gm13474-201ENSMUST00000122466 815 ntBASIC13.46□□□□□ -0.25
P04224 Gm22240-201ENSMUST00000175225 82 ntBASIC13.46□□□□□ -0.25
P04224 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P04224 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.46□□□□□ -0.25
P04224 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.46□□□□□ -0.25
P04224 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P04224 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P04224 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P04224 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
P04224 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.46□□□□□ -0.26
P04224 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
P04224 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
P04224 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
P04224 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
P04224 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.45□□□□□ -0.26
P04224 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
P04224 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.45□□□□□ -0.26
P04224 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.45□□□□□ -0.26
P04224 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P04224 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms