Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
TcraP01849 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TcraP01849 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
TcraP01849 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TcraP01849 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
TcraP01849 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.21□□□□□ -0.61
TcraP01849 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
TcraP01849 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.21□□□□□ -0.61
TcraP01849 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.21□□□□□ -0.61
TcraP01849 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.21□□□□□ -0.61
TcraP01849 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Gm7791-201ENSMUST00000219066 539 ntBASIC11.21□□□□□ -0.61
TcraP01849 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TcraP01849 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
TcraP01849 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
TcraP01849 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TcraP01849 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.21□□□□□ -0.62
TcraP01849 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TcraP01849 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TcraP01849 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TcraP01849 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.2□□□□□ -0.62
TcraP01849 Gm27011-201ENSMUST00000182352 972 ntBASIC11.2□□□□□ -0.62
TcraP01849 Gm36967-201ENSMUST00000193814 266 ntBASIC11.2□□□□□ -0.62
TcraP01849 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TcraP01849 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Rubie-203ENSMUST00000227803 2430 ntBASIC11.2□□□□□ -0.62
TcraP01849 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.2□□□□□ -0.62
TcraP01849 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TcraP01849 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TcraP01849 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.19□□□□□ -0.62
TcraP01849 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TcraP01849 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms