Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Gm12859-201ENSMUST00000117834 427 ntBASIC16.63■□□□□ 0.25
Slc6a20bO88575 Gm15321-201ENSMUST00000121290 288 ntBASIC16.63■□□□□ 0.25
Slc6a20bO88575 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.63■□□□□ 0.25
Slc6a20bO88575 Gm44344-201ENSMUST00000200287 129 ntBASIC16.63■□□□□ 0.25
Slc6a20bO88575 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.63■□□□□ 0.25
Slc6a20bO88575 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a20bO88575 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Gm27920-201ENSMUST00000183953 96 ntBASIC16.62■□□□□ 0.25
Slc6a20bO88575 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Gm6218-201ENSMUST00000219812 628 ntBASIC16.62■□□□□ 0.25
Slc6a20bO88575 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a20bO88575 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Slc6a20bO88575 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.61■□□□□ 0.25
Slc6a20bO88575 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.61■□□□□ 0.25
Slc6a20bO88575 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a20bO88575 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.6■□□□□ 0.25
Slc6a20bO88575 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.6■□□□□ 0.25
Slc6a20bO88575 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc6a20bO88575 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms