Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.75□□□□□ -0.21
Cops3O88543 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cops3O88543 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cops3O88543 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.74□□□□□ -0.21
Cops3O88543 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.74□□□□□ -0.21
Cops3O88543 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.74□□□□□ -0.21
Cops3O88543 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Cops3O88543 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cops3O88543 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.73□□□□□ -0.21
Cops3O88543 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.73□□□□□ -0.21
Cops3O88543 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.73□□□□□ -0.21
Cops3O88543 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cops3O88543 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cops3O88543 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cops3O88543 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Gm13312-201ENSMUST00000119631 718 ntBASIC13.73□□□□□ -0.21
Cops3O88543 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.73□□□□□ -0.21
Cops3O88543 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Cops3O88543 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.73□□□□□ -0.21
Cops3O88543 Gm29518-201ENSMUST00000190858 372 ntBASIC13.73□□□□□ -0.21
Cops3O88543 Gm45328-201ENSMUST00000210942 917 ntBASIC13.73□□□□□ -0.21
Cops3O88543 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.73□□□□□ -0.21
Cops3O88543 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.73□□□□□ -0.21
Cops3O88543 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cops3O88543 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms