Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3bO88509 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3bO88509 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3bO88509 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3bO88509 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3bO88509 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.79□□□□□ -0.04
Dnmt3bO88509 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.78□□□□□ -0.04
Dnmt3bO88509 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.78□□□□□ -0.04
Dnmt3bO88509 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gm8000-201ENSMUST00000188378 592 ntBASIC14.78□□□□□ -0.04
Dnmt3bO88509 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.78□□□□□ -0.04
Dnmt3bO88509 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Dnmt3bO88509 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dnmt3bO88509 Gm7862-201ENSMUST00000121461 292 ntBASIC14.77□□□□□ -0.05
Dnmt3bO88509 Gm11594-201ENSMUST00000122313 162 ntBASIC14.77□□□□□ -0.05
Dnmt3bO88509 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.77□□□□□ -0.05
Dnmt3bO88509 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dnmt3bO88509 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.76□□□□□ -0.05
Dnmt3bO88509 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.76□□□□□ -0.05
Dnmt3bO88509 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dnmt3bO88509 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms