Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.88□□□□□ -0.35
Ccr6O54689 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccr6O54689 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccr6O54689 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccr6O54689 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.87□□□□□ -0.35
Ccr6O54689 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Ccr6O54689 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccr6O54689 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccr6O54689 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccr6O54689 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Ccr6O54689 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccr6O54689 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccr6O54689 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccr6O54689 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccr6O54689 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Gm13474-201ENSMUST00000122466 815 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Gm10052-201ENSMUST00000168019 960 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Gm8495-201ENSMUST00000188740 694 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Gm7213-201ENSMUST00000215977 950 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Ccr6O54689 Gm7729-201ENSMUST00000050143 801 ntBASIC12.86□□□□□ -0.35
Ccr6O54689 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ccr6O54689 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccr6O54689 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.85□□□□□ -0.35
Ccr6O54689 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.85□□□□□ -0.35
Ccr6O54689 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ccr6O54689 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Ccr6O54689 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms