Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Dsg3O35902 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Dsg3O35902 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Mir7023-201ENSMUST00000185093 64 ntBASIC16.34■□□□□ 0.21
Dsg3O35902 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Dsg3O35902 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Dsg3O35902 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Dsg3O35902 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Dsg3O35902 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Dsg3O35902 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Dsg3O35902 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Dsg3O35902 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Dsg3O35902 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Dsg3O35902 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.33■□□□□ 0.2
Dsg3O35902 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.33■□□□□ 0.2
Dsg3O35902 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Dsg3O35902 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.33■□□□□ 0.2
Dsg3O35902 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.33■□□□□ 0.2
Dsg3O35902 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Dsg3O35902 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Dsg3O35902 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Dsg3O35902 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.32■□□□□ 0.2
Dsg3O35902 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 Gm20553-201ENSMUST00000204205 844 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.32■□□□□ 0.2
Dsg3O35902 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.32■□□□□ 0.2
Dsg3O35902 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.32■□□□□ 0.2
Dsg3O35902 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Dsg3O35902 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Dsg3O35902 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.31■□□□□ 0.2
Dsg3O35902 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.31■□□□□ 0.2
Dsg3O35902 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.31■□□□□ 0.2
Dsg3O35902 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
Dsg3O35902 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Dsg3O35902 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.31■□□□□ 0.2
Dsg3O35902 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Dsg3O35902 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms