Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.14□□□□□ -0.47
Efnb3O35393 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Efnb3O35393 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Efnb3O35393 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.13□□□□□ -0.47
Efnb3O35393 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.13□□□□□ -0.47
Efnb3O35393 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Efnb3O35393 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.13□□□□□ -0.47
Efnb3O35393 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Efnb3O35393 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Efnb3O35393 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Efnb3O35393 Gm37722-201ENSMUST00000193757 208 ntBASIC12.13□□□□□ -0.47
Efnb3O35393 Gm7977-201ENSMUST00000193787 748 ntBASIC12.13□□□□□ -0.47
Efnb3O35393 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.13□□□□□ -0.47
Efnb3O35393 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Efnb3O35393 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.13□□□□□ -0.47
Efnb3O35393 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Efnb3O35393 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.13□□□□□ -0.47
Efnb3O35393 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Efnb3O35393 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.13□□□□□ -0.47
Efnb3O35393 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Gm12134-201ENSMUST00000122109 520 ntBASIC12.12□□□□□ -0.47
Efnb3O35393 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.12□□□□□ -0.47
Efnb3O35393 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.12□□□□□ -0.47
Efnb3O35393 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.12□□□□□ -0.47
Efnb3O35393 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Efnb3O35393 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.11□□□□□ -0.47
Efnb3O35393 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.11□□□□□ -0.47
Efnb3O35393 Gm11355-201ENSMUST00000121120 306 ntBASIC12.11□□□□□ -0.47
Efnb3O35393 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Efnb3O35393 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.11□□□□□ -0.47
Efnb3O35393 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Efnb3O35393 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Efnb3O35393 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Efnb3O35393 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Efnb3O35393 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Efnb3O35393 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms