Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfsf11O35235 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.97□□□□□ -0.49
Tnfsf11O35235 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.97□□□□□ -0.49
Tnfsf11O35235 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gm10566-201ENSMUST00000086739 996 ntBASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfsf11O35235 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.96□□□□□ -0.49
Tnfsf11O35235 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gm27011-201ENSMUST00000182352 972 ntBASIC11.96□□□□□ -0.49
Tnfsf11O35235 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfsf11O35235 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfsf11O35235 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.96□□□□□ -0.5
Tnfsf11O35235 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.95□□□□□ -0.5
Tnfsf11O35235 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfsf11O35235 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms