Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.47■□□□□ 0.71
Col15a1O35206 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col15a1O35206 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.47■□□□□ 0.71
Col15a1O35206 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col15a1O35206 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.47■□□□□ 0.71
Col15a1O35206 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col15a1O35206 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.46■□□□□ 0.71
Col15a1O35206 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.46■□□□□ 0.71
Col15a1O35206 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.46■□□□□ 0.71
Col15a1O35206 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Gm43767-201ENSMUST00000198933 381 ntBASIC19.46■□□□□ 0.71
Col15a1O35206 Gm44855-201ENSMUST00000205725 362 ntBASIC19.46■□□□□ 0.71
Col15a1O35206 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col15a1O35206 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.46■□□□□ 0.71
Col15a1O35206 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.46■□□□□ 0.71
Col15a1O35206 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.46■□□□□ 0.71
Col15a1O35206 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col15a1O35206 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.46■□□□□ 0.7
Col15a1O35206 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Col15a1O35206 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.45■□□□□ 0.7
Col15a1O35206 Gm15321-201ENSMUST00000121290 288 ntBASIC19.45■□□□□ 0.7
Col15a1O35206 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.45■□□□□ 0.7
Col15a1O35206 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.45■□□□□ 0.7
Col15a1O35206 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.45■□□□□ 0.7
Col15a1O35206 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Col15a1O35206 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col15a1O35206 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Col15a1O35206 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col15a1O35206 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Celf4-206ENSMUST00000224553 1729 ntBASIC19.44■□□□□ 0.7
Col15a1O35206 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.44■□□□□ 0.7
Col15a1O35206 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col15a1O35206 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col15a1O35206 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.44■□□□□ 0.7
Col15a1O35206 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Gm5566-201ENSMUST00000116118 459 ntBASIC19.44■□□□□ 0.7
Col15a1O35206 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Col15a1O35206 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.44■□□□□ 0.7
Col15a1O35206 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.44■□□□□ 0.7
Col15a1O35206 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col15a1O35206 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Col15a1O35206 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col15a1O35206 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms