Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Gm6415-201ENSMUST00000118488 348 ntBASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Mir6977-201ENSMUST00000184960 64 ntBASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.68■□□□□ 0.42
Clrn2B2RVW2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Gm15483-201ENSMUST00000120338 456 ntBASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Gm16026-204ENSMUST00000162652 683 ntBASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Clrn2B2RVW2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Gm2810-201ENSMUST00000118681 990 ntBASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.66■□□□□ 0.42
Clrn2B2RVW2 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn2B2RVW2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Gm11543-201ENSMUST00000120758 370 ntBASIC17.65■□□□□ 0.42
Clrn2B2RVW2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Gm17837-201ENSMUST00000186435 985 ntBASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn2B2RVW2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn2B2RVW2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn2B2RVW2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn2B2RVW2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn2B2RVW2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms