Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm10698-201ENSMUST00000182663 604 ntBASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms