Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm18666-201ENSMUST00000190039 958 ntBASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm37179-201ENSMUST00000194862 823 ntBASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Trav8-1A0A075B641 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav8-1A0A075B641 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav8-1A0A075B641 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms