Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7n-4A0A075B620 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Gm7367-201ENSMUST00000057611 492 ntBASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav7n-4A0A075B620 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gm15378-201ENSMUST00000121894 207 ntBASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Gm37179-201ENSMUST00000194862 823 ntBASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav7n-4A0A075B620 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav7n-4A0A075B620 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms