Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 App-207ENSMUST00000227737 2827 ntBASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav13d-1A0A075B606 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav13d-1A0A075B606 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm27525-201ENSMUST00000184465 107 ntBASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm8000-201ENSMUST00000188378 592 ntBASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-1A0A075B606 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms