Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.13□□□□□ -0.47
Lsm4Q9QXA5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Lsm4Q9QXA5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Lsm4Q9QXA5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.1□□□□□ -0.47
Lsm4Q9QXA5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms