Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm44454-201ENSMUST00000198541 138 ntBASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm10252-201ENSMUST00000209541 832 ntBASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.32■□□□□ 0.2
Rpf2Q9JJ80 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Mir3081-201ENSMUST00000175305 84 ntBASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpf2Q9JJ80 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Rprl3-201ENSMUST00000157400 290 ntBASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Gm10231-201ENSMUST00000181584 441 ntBASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Gm10175-202ENSMUST00000208752 441 ntBASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rpf2Q9JJ80 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rpf2Q9JJ80 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms