Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Olfr129-201ENSMUST00000122318 993 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Mir3081-201ENSMUST00000175305 84 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm8825-201ENSMUST00000182565 998 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm4518-201ENSMUST00000182638 718 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccl28Q9JIL2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Rprl3-201ENSMUST00000157400 290 ntBASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccl28Q9JIL2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccl28Q9JIL2 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms