Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Praf2Q9JIG8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Praf2Q9JIG8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.64□□□□□ -0.23
Praf2Q9JIG8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Mir6404-201ENSMUST00000183699 94 ntBASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.64□□□□□ -0.23
Praf2Q9JIG8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm18284-201ENSMUST00000172604 624 ntBASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm20049-201ENSMUST00000219950 730 ntBASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Praf2Q9JIG8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.62□□□□□ -0.23
Praf2Q9JIG8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms