Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Mir6404-201ENSMUST00000183699 94 ntBASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Gm6296-201ENSMUST00000222599 943 ntBASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubb3Q9ERD7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Gm6443-201ENSMUST00000203599 874 ntBASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubb3Q9ERD7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gm7862-201ENSMUST00000121461 292 ntBASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gm43514-201ENSMUST00000198852 424 ntBASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.24■□□□□ 0.03
Tubb3Q9ERD7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Gm7506-201ENSMUST00000207758 815 ntBASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tubb3Q9ERD7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms