Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hcfc2Q9D968 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Gm30025-201ENSMUST00000218555 728 ntBASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Gm5417-201ENSMUST00000079706 384 ntBASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hcfc2Q9D968 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Mir1668-201ENSMUST00000184114 107 ntBASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hcfc2Q9D968 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Gm10052-201ENSMUST00000168019 960 ntBASIC11.67□□□□□ -0.54
Hcfc2Q9D968 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.67□□□□□ -0.54
Hcfc2Q9D968 Gm7729-201ENSMUST00000050143 801 ntBASIC11.67□□□□□ -0.54
Hcfc2Q9D968 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms