Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm44443-201ENSMUST00000204396 5633 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm8825-201ENSMUST00000182565 998 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm4518-201ENSMUST00000182638 718 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp5Q9D7S9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm15794-201ENSMUST00000120182 631 ntBASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm11950-201ENSMUST00000121615 838 ntBASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Gm45328-201ENSMUST00000210942 917 ntBASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp5Q9D7S9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Mir6982-201ENSMUST00000184354 68 ntBASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp5Q9D7S9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp5Q9D7S9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms