Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim16Q99PP9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim16Q99PP9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.03■□□□□ -0
Trim16Q99PP9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.03■□□□□ -0
Trim16Q99PP9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim16Q99PP9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Trim16Q99PP9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim16Q99PP9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Trim16Q99PP9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Trim16Q99PP9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.03■□□□□ -0
Trim16Q99PP9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim16Q99PP9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim16Q99PP9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim16Q99PP9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trim16Q99PP9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.02■□□□□ -0
Trim16Q99PP9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.02■□□□□ -0
Trim16Q99PP9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim16Q99PP9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.02■□□□□ -0
Trim16Q99PP9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.02■□□□□ -0
Trim16Q99PP9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trim16Q99PP9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim16Q99PP9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trim16Q99PP9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim16Q99PP9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.01□□□□□ -0.01
Trim16Q99PP9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.01□□□□□ -0.01
Trim16Q99PP9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Gm25745-201ENSMUST00000174945 133 ntBASIC15.01□□□□□ -0.01
Trim16Q99PP9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim16Q99PP9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15□□□□□ -0.01
Trim16Q99PP9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15□□□□□ -0.01
Trim16Q99PP9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim16Q99PP9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim16Q99PP9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15□□□□□ -0.01
Trim16Q99PP9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15□□□□□ -0.01
Trim16Q99PP9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15□□□□□ -0.01
Trim16Q99PP9 Cmtm5-203ENSMUST00000227441 610 ntBASIC15□□□□□ -0.01
Trim16Q99PP9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim16Q99PP9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms