Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.13■□□□□ 0.17
Clp1Q99LI9 Gm43438-201ENSMUST00000198133 379 ntBASIC16.13■□□□□ 0.17
Clp1Q99LI9 Gm6888-201ENSMUST00000221983 706 ntBASIC16.13■□□□□ 0.17
Clp1Q99LI9 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.13■□□□□ 0.17
Clp1Q99LI9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clp1Q99LI9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Gm13015-201ENSMUST00000118674 204 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Gm15483-201ENSMUST00000120338 456 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Gm28630-201ENSMUST00000187806 498 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Gm18049-201ENSMUST00000208909 581 ntBASIC16.12■□□□□ 0.17
Clp1Q99LI9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clp1Q99LI9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.11■□□□□ 0.17
Clp1Q99LI9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Gm8410-201ENSMUST00000117225 605 ntBASIC16.11■□□□□ 0.17
Clp1Q99LI9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.11■□□□□ 0.17
Clp1Q99LI9 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.11■□□□□ 0.17
Clp1Q99LI9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.11■□□□□ 0.17
Clp1Q99LI9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.11■□□□□ 0.17
Clp1Q99LI9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clp1Q99LI9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clp1Q99LI9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.09■□□□□ 0.17
Clp1Q99LI9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clp1Q99LI9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clp1Q99LI9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Clp1Q99LI9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms