Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.01□□□□□ -0.17
Lims1Q99JW4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lims1Q99JW4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Gm8242-201ENSMUST00000193029 1420 ntBASIC14□□□□□ -0.17
Lims1Q99JW4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14□□□□□ -0.17
Lims1Q99JW4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14□□□□□ -0.17
Lims1Q99JW4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Gm18622-201ENSMUST00000219361 595 ntBASIC14□□□□□ -0.17
Lims1Q99JW4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14□□□□□ -0.17
Lims1Q99JW4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lims1Q99JW4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lims1Q99JW4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lims1Q99JW4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lims1Q99JW4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.99□□□□□ -0.17
Lims1Q99JW4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.99□□□□□ -0.17
Lims1Q99JW4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Lims1Q99JW4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Gm9103-201ENSMUST00000119371 405 ntBASIC13.98□□□□□ -0.17
Lims1Q99JW4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms