Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Mir6990-201ENSMUST00000183724 91 ntBASIC15.28■□□□□ 0.04
Cacna1dQ99246 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1dQ99246 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.27■□□□□ 0.04
Cacna1dQ99246 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gm14722-201ENSMUST00000118943 689 ntBASIC15.27■□□□□ 0.04
Cacna1dQ99246 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gm43125-201ENSMUST00000201724 730 ntBASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.27■□□□□ 0.04
Cacna1dQ99246 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1dQ99246 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1dQ99246 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.26■□□□□ 0.03
Cacna1dQ99246 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.26■□□□□ 0.03
Cacna1dQ99246 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.26■□□□□ 0.03
Cacna1dQ99246 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Gm8396-201ENSMUST00000057361 823 ntBASIC15.26■□□□□ 0.03
Cacna1dQ99246 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.26■□□□□ 0.03
Cacna1dQ99246 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cacna1dQ99246 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms