Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Actl10-202ENSMUST00000226583 1501 ntBASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb3Q91XZ7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb3Q91XZ7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Gm13186-201ENSMUST00000118031 316 ntBASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Gm29518-201ENSMUST00000190858 372 ntBASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb3Q91XZ7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Gm18115-201ENSMUST00000221209 621 ntBASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb3Q91XZ7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms