Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.74□□□□□ -0.05
Lsm1Q8VC85 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.74□□□□□ -0.05
Lsm1Q8VC85 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Lsm1Q8VC85 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gm7284-201ENSMUST00000131667 944 ntBASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Lsm1Q8VC85 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Gm33142-201ENSMUST00000193913 867 ntBASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.72□□□□□ -0.05
Lsm1Q8VC85 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Efs-202ENSMUST00000227037 2540 ntBASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.72□□□□□ -0.05
Lsm1Q8VC85 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lsm1Q8VC85 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm1Q8VC85 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm1Q8VC85 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.71□□□□□ -0.06
Lsm1Q8VC85 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.71□□□□□ -0.06
Lsm1Q8VC85 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lsm1Q8VC85 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm1Q8VC85 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm1Q8VC85 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm1Q8VC85 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms