Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Gm27430-201ENSMUST00000184585 107 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Mir7023-201ENSMUST00000185093 64 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Gm44333-201ENSMUST00000197168 107 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp7Q8R1T1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Gm6973-201ENSMUST00000117080 721 ntBASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp7Q8R1T1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp7Q8R1T1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp7Q8R1T1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Gm27321-201ENSMUST00000185021 205 ntBASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp7Q8R1T1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms