Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rpp40Q8R1F9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Gm4995-201ENSMUST00000117247 432 ntBASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rpp40Q8R1F9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rpp40Q8R1F9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Mir3113-201ENSMUST00000175478 76 ntBASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Gm17968-201ENSMUST00000194902 784 ntBASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rpp40Q8R1F9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Gm10175-201ENSMUST00000086013 645 ntBASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rpp40Q8R1F9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rpp40Q8R1F9 Mir8117-201ENSMUST00000184773 107 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms