Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx54Q8K4L0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm14722-201ENSMUST00000118943 689 ntBASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm20445-201ENSMUST00000061905 565 ntBASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx54Q8K4L0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx54Q8K4L0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Gm45668-201ENSMUST00000211271 493 ntBASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx54Q8K4L0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx54Q8K4L0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Gm4875-201ENSMUST00000118257 786 ntBASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx54Q8K4L0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms