Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf4Q8K4J2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ebf4Q8K4J2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf4Q8K4J2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ebf4Q8K4J2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Mir1199-201ENSMUST00000117015 119 ntBASIC14□□□□□ -0.17
Ebf4Q8K4J2 Gm23547-201ENSMUST00000158210 271 ntBASIC14□□□□□ -0.17
Ebf4Q8K4J2 Gm3375-201ENSMUST00000203929 796 ntBASIC14□□□□□ -0.17
Ebf4Q8K4J2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Carlr-201ENSMUST00000181515 2574 ntBASIC14□□□□□ -0.17
Ebf4Q8K4J2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ebf4Q8K4J2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf4Q8K4J2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf4Q8K4J2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf4Q8K4J2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf4Q8K4J2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ebf4Q8K4J2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms