Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mrpl47Q8K2Y7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Gm44454-201ENSMUST00000198541 138 ntBASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Gm19164-201ENSMUST00000210667 640 ntBASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mrpl47Q8K2Y7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Mrpl47Q8K2Y7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.21■□□□□ 0.03
Mrpl47Q8K2Y7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms