Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gm45167-201ENSMUST00000208007 322 ntBASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn1Q8K0T0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Gm12350-201ENSMUST00000121208 462 ntBASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Gm10499-201ENSMUST00000174094 934 ntBASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtn1Q8K0T0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtn1Q8K0T0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtn1Q8K0T0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms