Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 SART3-203ENST00000546611 1184 ntBASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS4Q8IUM7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS4Q8IUM7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 AL356309.3-201ENST00000624132 1934 ntBASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 MIR940-201ENST00000401276 94 ntBASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS4Q8IUM7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 MIR1233-2-201ENST00000408138 82 ntBASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 MIR1233-1-201ENST00000408722 82 ntBASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 BX842568.4-201ENST00000421222 227 ntBASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 AC112698.1-201ENST00000510299 916 ntBASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 AC145285.3-201ENST00000564603 959 ntBASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS4Q8IUM7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 RPS2P1-201ENST00000434010 821 ntBASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.47■□□□□ 0.71
NPAS4Q8IUM7 IGHV3-22-201ENST00000520721 359 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms