Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Gm15372-201ENSMUST00000120729 834 ntBASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.78■□□□□ 0.28
Sox30Q8CGW4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox30Q8CGW4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sox30Q8CGW4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Gm23634-201ENSMUST00000175071 91 ntBASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox30Q8CGW4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.75■□□□□ 0.27
Sox30Q8CGW4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sox30Q8CGW4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms