Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Smc5Q8CG46 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smc5Q8CG46 Gm12497-201ENSMUST00000138778 237 ntBASIC19■□□□□ 0.63
Smc5Q8CG46 Gm27867-201ENSMUST00000184778 125 ntBASIC19■□□□□ 0.63
Smc5Q8CG46 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc5Q8CG46 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc5Q8CG46 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Smc5Q8CG46 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc5Q8CG46 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19■□□□□ 0.63
Smc5Q8CG46 Celf4-206ENSMUST00000224553 1729 ntBASIC19■□□□□ 0.63
Smc5Q8CG46 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.99■□□□□ 0.63
Smc5Q8CG46 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc5Q8CG46 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc5Q8CG46 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.97■□□□□ 0.63
Smc5Q8CG46 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Gm8318-201ENSMUST00000182954 872 ntBASIC18.97■□□□□ 0.63
Smc5Q8CG46 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.97■□□□□ 0.63
Smc5Q8CG46 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smc5Q8CG46 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc5Q8CG46 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Smc5Q8CG46 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc5Q8CG46 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc5Q8CG46 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.96■□□□□ 0.63
Smc5Q8CG46 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms