Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.13■□□□□ 0.33
NkrfQ8BY02 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Mir6956-201ENSMUST00000183598 62 ntBASIC17.13■□□□□ 0.33
NkrfQ8BY02 Gm5312-201ENSMUST00000203728 547 ntBASIC17.13■□□□□ 0.33
NkrfQ8BY02 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.13■□□□□ 0.33
NkrfQ8BY02 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NkrfQ8BY02 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NkrfQ8BY02 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.12■□□□□ 0.33
NkrfQ8BY02 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.12■□□□□ 0.33
NkrfQ8BY02 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NkrfQ8BY02 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.11■□□□□ 0.33
NkrfQ8BY02 Gm14057-201ENSMUST00000120631 482 ntBASIC17.11■□□□□ 0.33
NkrfQ8BY02 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
NkrfQ8BY02 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NkrfQ8BY02 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.11■□□□□ 0.33
NkrfQ8BY02 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NkrfQ8BY02 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Gm13616-201ENSMUST00000120600 222 ntBASIC17.1■□□□□ 0.33
NkrfQ8BY02 Gm13365-201ENSMUST00000121188 973 ntBASIC17.1■□□□□ 0.33
NkrfQ8BY02 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.1■□□□□ 0.33
NkrfQ8BY02 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NkrfQ8BY02 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
NkrfQ8BY02 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms