Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf7Q8BTV2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf7Q8BTV2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf7Q8BTV2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf7Q8BTV2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf7Q8BTV2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm25016-201ENSMUST00000158399 131 ntBASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf7Q8BTV2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm11355-201ENSMUST00000121120 306 ntBASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf7Q8BTV2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms