Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Gm7506-201ENSMUST00000207758 815 ntBASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Birc2-201ENSMUST00000054878 378 ntBASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clrn3Q8BHH8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Gm19164-201ENSMUST00000210667 640 ntBASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clrn3Q8BHH8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Gm18622-201ENSMUST00000219361 595 ntBASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clrn3Q8BHH8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms